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1.
Article in English | MEDLINE | ID: mdl-38668844

ABSTRACT

Carbonic anhydrase-producing microorganisms can rely on their metabolism for carbon sequestration and carbonate precipitation, which is a relatively effective mode among the known microbially induced carbonate precipitation (MICP) methods. A newly carbonic anhydrase-producing strain was isolated from soil samples. 16S rDNA gene sequencing showed this strain had 99.18% sequence identity to Chryseobacterium gambrini. Various culture parameters (temperature, pH, rotational speed, inoculum size, and metal ions) were optimized for optimal microbial growth and CA activities. Optimal culture conditions were as follows: temperature of 30 °C, pH 6-7, rotational speed 150 rpm, and inoculum size 1%. It was observed that Co2+ and Mn2+ can improve CA activity with optimal concentrations of 0.02 mM and 0.01 mM, respectively. Furthermore, the introduction of CO2 for 15 min daily leads to a 36% increase in the final production of biotic CaCO3, reaching 2.884 g/L. Characterization of the mineralization precipitates was conducted to reveal the mechanism of the carbonic anhydrase-producing bacterium. Lastly, an analysis of the crystalline species and content of the biogenic CaCO3 was performed to lay the groundwork for future crystalline adjustments and to offer technical support for the application of the calcium method.

2.
Int Immunopharmacol ; 133: 112056, 2024 May 30.
Article in English | MEDLINE | ID: mdl-38626546

ABSTRACT

OBJECTIVES: The aim of this study was to investigate the effect of 4µ8c, an inhibitor targeting the endoplasmic reticulum stress-associated factor IRE1α, on macrophage polarization in an experimental model of diabetic periodontitis through ex vivo experiments. MATERIALS AND METHODS: Local alveolar bone parameters were evaluated using Micro-CT following intraperitoneal administration of 4µ8c in mice with experimental diabetic periodontitis. Surface markers indicating macrophage polarization were identified using immunofluorescence. In vitro experiments were performed employing bone marrow-derived macrophages and gingival fibroblasts. Macrophage polarization was determined using flow cytometry. Principal impacted signaling pathways were identified through Western blot analysis. RESULTS: Results from both in vitro and in vivo experiments demonstrated that 4µ8c mitigated alveolar bone resorption and inflammation in mice with diabetic periodontitis. Furthermore, it modulated macrophage polarization towards the M2 phenotype and augmented M2 macrophage polarization through the MAPK signaling pathway. CONCLUSIONS: These findings suggest that inhibiting IRE1α can modulate macrophage polarization and alleviate ligature-induced diabetic periodontitis via the MAPK signaling pathway. This unveils a novel mechanism, offering a scientific foundation for the treatment of experimental diabetic periodontitis.


Subject(s)
Diabetes Mellitus, Type 2 , Endoplasmic Reticulum Stress , Endoribonucleases , Macrophages , Mice, Inbred C57BL , Periodontitis , Protein Serine-Threonine Kinases , Animals , Endoplasmic Reticulum Stress/drug effects , Endoplasmic Reticulum Stress/immunology , Protein Serine-Threonine Kinases/metabolism , Periodontitis/immunology , Periodontitis/metabolism , Endoribonucleases/metabolism , Macrophages/immunology , Macrophages/metabolism , Macrophages/drug effects , Mice , Diabetes Mellitus, Type 2/immunology , Diabetes Mellitus, Type 2/metabolism , Male , Diabetes Mellitus, Experimental/immunology , Diabetes Mellitus, Experimental/metabolism , Cells, Cultured , Alveolar Bone Loss/immunology , MAP Kinase Signaling System/drug effects , Humans
3.
J Colloid Interface Sci ; 661: 1011-1024, 2024 May.
Article in English | MEDLINE | ID: mdl-38335786

ABSTRACT

The high ion leaching, low photogenerated charge separation efficiency, and slow metal valence cycling of Fe-based metal organic frameworks (MOFs) have limited their application in the deep treatment of organic pollutants. Herein, FeCu bimetallic MOFs (FeCuBDC) were synthesized using a modified solvothermal method, and a coupled photo-Fenton degradation system was successfully constructed. Degradation performance tests showed that FeCuBDC could efficiently degrade 99.3% ± 0.1% of 50 mg/L phenol within 40 min. The reaction rate constants of the photo-Fenton system were 11.0 and 64.7 times higher than those of the single Fenton reaction and photocatalysis, respectively. FeCuBDC also exhibits good cycling stability, degradation generalization, and excellent photoelectric catalytic properties. Such a considerable enhancement in the overall performance pertains to the following. First, the introduction of Cu into Fe-MOFs not only improves the crystallinity and stability, but also reduces the band gap value, increases the absorption capacity of visible light, and promotes the generation of photogenerated carriers. Second, the FeCu in MOFs are all mixed valence. Initially, the high-valence FeCu captures photogenerated electrons and promotes photogenerated charge separation and transfer. Then, the low-valence FeCu adsorbs and decomposes H2O2, accelerating the valence cycling of the bimetallic sites. The core of the reaction mechanism is that FeCuBDC effectively promotes the photo-Fenton synergy.

4.
Nat Commun ; 15(1): 1045, 2024 Feb 05.
Article in English | MEDLINE | ID: mdl-38316778

ABSTRACT

G-quadruplexes (G4s) can recruit transcription factors to activate gene expression, but detailed mechanisms remain enigmatic. Here, we demonstrate that G4s in the CCND1 promoter propel the motility in MAZ phase-separated condensates and subsequently activate CCND1 transcription. Zinc finger (ZF) 2 of MAZ is a responsible for G4 binding, while ZF3-5, but not a highly disordered region, is critical for MAZ condensation. MAZ nuclear puncta overlaps with signals of G4s and various coactivators including BRD4, MED1, CDK9 and active RNA polymerase II, as well as gene activation histone markers. MAZ mutants lacking either G4 binding or phase separation ability did not form nuclear puncta, and showed deficiencies in promoting hepatocellular carcinoma cell proliferation and xenograft tumor formation. Overall, we unveiled that G4s recruit MAZ to the CCND1 promoter and facilitate the motility in MAZ condensates that compartmentalize coactivators to activate CCND1 expression and subsequently exacerbate hepatocarcinogenesis.


Subject(s)
Cyclin D1 , DNA-Binding Proteins , G-Quadruplexes , Transcription Factors , Humans , Bromodomain Containing Proteins , Cell Cycle Proteins/genetics , Cell Cycle Proteins/metabolism , Cyclin D1/genetics , Cyclin D1/metabolism , DNA-Binding Proteins/metabolism , Nuclear Proteins/metabolism , Transcription Factors/metabolism , Zinc Fingers/genetics
5.
J Agric Food Chem ; 72(1): 274-283, 2024 Jan 10.
Article in English | MEDLINE | ID: mdl-38109418

ABSTRACT

Xenorhabdus can produce numerous natural products, but their development has been hampered by the lack of a seamless genetic manipulation method. In this study, we compared several lethal genes and determined the sacB gene as the most effective counter-selection marker and then established a dual selection/counter-selection system by integrating neo and sacB genes into one cassette. This provides an efficient and seamless genetic manipulation method for Xenorhabdus. Using this method, DNA fragments ranging from 205 to 47,788 bp in length were seamlessly knocked out or replaced with impressively high positive rates of 80 to 100% in Xenorhabdus budapestensis XBD8. In addition, the method was successfully applied with good efficiency (45-100%) in Xenorhabdus nematophila CB6. To further validate the method, different constitutive promoters were used to replace the native fclC promoter in a batch experiment. The positivity rate remained consistently high, at 46.3%. In comparison to WT XBD8, the recombinant strain MX14 demonstrated a significant increase in the production of fabclavine 7 and fabclavine 8 by 4.97-fold and 3.22-fold, respectively, while the overall production of fabclavines was enhanced by 3.52-fold.


Subject(s)
Xenorhabdus , Xenorhabdus/genetics , Promoter Regions, Genetic
6.
J Transl Med ; 21(1): 781, 2023 11 04.
Article in English | MEDLINE | ID: mdl-37925419

ABSTRACT

BACKGROUND: Diabetes mellitus (DM) and periodontitis are two prevalent diseases with mutual influence. Accumulation of advanced glycation end products (AGEs) in hyperglycemia may impair cell function and worsen periodontal conditions. N6-methyladenosine (m6A) is an important post-transcriptional modification in RNAs that regulates cell fate determinant and progression of diseases. However, whether m6A methylation participates in the process of periodontitis with diabetes is unclear. Thus, we aimed to investigate the effects of AGEs on bone marrow mesenchymal stem cells (BMSCs), elucidate the m6A modification mechanism in diabetes-associated periodontitis. METHODS: Periodontitis with diabetes were established by high-fat diet/streptozotocin injection and silk ligation. M6A modifications in alveolar bone were demonstrated by RNA immunoprecipitation sequence. BMSCs treated with AGEs, fat mass and obesity associated (FTO) protein knockdown and sclerostin (SOST) interference were evaluated by quantitative polymerase chain reaction, western blot, immunofluorescence, alkaline phosphatase and Alizarin red S staining. RESULTS: Diabetes damaged alveolar bone regeneration was validated in vivo. In vitro experiments showed AGEs inhibited BMSCs osteogenesis and influenced the FTO expression and m6A level in total RNA. FTO knockdown increased the m6A levels and reversed the AGE-induced inhibition of BMSCs differentiation. Mechanically, FTO regulated m6A modification on SOST transcripts, and AGEs affected the binding of FTO to SOST transcripts. FTO knockdown accelerated the degradation of SOST mRNA in presence of AGEs. Interference with SOST expression in AGE-treated BMSCs partially rescued the osteogenesis by activating Wnt Signaling. CONCLUSIONS: AGEs impaired BMSCs osteogenesis by regulating SOST in an m6A-dependent manner, presenting a promising method for bone regeneration treatment of periodontitis with diabetes.


Subject(s)
Adaptor Proteins, Signal Transducing , Alpha-Ketoglutarate-Dependent Dioxygenase FTO , Diabetes Mellitus , Mesenchymal Stem Cells , Periodontitis , Humans , Alpha-Ketoglutarate-Dependent Dioxygenase FTO/genetics , Bone Marrow Cells/metabolism , Cell Differentiation , Cells, Cultured , Glycation End Products, Advanced/pharmacology , Osteogenesis , Periodontitis/genetics , RNA/metabolism , Adaptor Proteins, Signal Transducing/genetics
7.
J Appl Microbiol ; 134(9)2023 Sep 05.
Article in English | MEDLINE | ID: mdl-37656887

ABSTRACT

AIMS: Black scurf disease, caused by Rhizoctonia solani, is a severe soil-borne and tuber-borne disease, which occurs and spreads in potato growing areas worldwide and poses a serious threat to potato production. New biofungicide is highly desirable for addressing the issue, and natural products (NPs) from Xenorhabdus spp. provide prolific resources for biofungicide development. In this study, we aim to identify antifungal NPs from Xenorhabdus spp. for the management of this disease. METHODS AND RESULTS: Out of the 22 Xenorhabdus strains investigated, Xenorhabdus budapestensis 8 (XBD8) was determined to be the most promising candidate with the measured IC50 value of its cell-free supernatant against R. solani as low as 0.19 ml l-1. The major antifungal compound in XBD8 started to be synthesized in the middle logarithmic phase and reached a stable level at stationary phase. Core gene deletion coupled with high-resolution mass spectrometry analysis determined the major antifungal NPs as fabclavine derivatives, Fcl-7 and 8, which showed broad-spectrum bioactivity against important pathogenic fungi. Impressively, the identified fabclavine derivatives effectively controlled black scurf disease in both greenhouse and field experiments, significantly improving tuber quality and increasing with marketable tuber yield from 29 300 to 35 494 kg ha-1, comparable with chemical fungicide fludioxonil. CONCLUSIONS: The fabclavine derivatives Fcl-7 and 8 were determined as the major antifungal NPs in XBD8, which demonstrated a bright prospect for the management of black scurf disease.


Subject(s)
Biological Products , Dandruff , Xenorhabdus , Humans , Antifungal Agents
8.
Langmuir ; 39(29): 10112-10121, 2023 Jul 25.
Article in English | MEDLINE | ID: mdl-37452782

ABSTRACT

Nanobubble (NB) technology has demonstrated the potential to enhance or substitute for current treatment processes in various areas. However, research employing it as a novel advanced oxidation process has thus far been relatively limited. Herein, we focused on the oxidative capacity of oxygen NBs and investigated the feasibility of utilizing their enhanced oxidation of ferrous ions (Fe2+) in a sulfuric acid medium when using copper as a catalyst and their effect mechanism. It was demonstrated that oxygen NBs could collapse to produce hydroxyl radicals (·OH) in the absence of dynamic stimuli using electron spin resonance spectroscopy, and methylene blue was used as a molecular probe for ·OH to illustrate that NB stability, determined by their properties, is the critical factor affecting ·OH release. In subsequent Fe2+ oxidation experiments, it was discovered that both strong acidity and copper ions (Cu2+) contribute to accelerating the collapse of NBs to produce ·OH. While ·OH derived from the collapse of NBs acts on Fe2+, the molecular oxygen generated homologously with ·OH will further activate the catalytic oxidation of Fe2+ by interacting with Cu2+. With the synergistic effect of the above two oxidation-driven mechanisms, the oxidation rate of Fe2+ can be significantly increased up to 88% due to the exceptional properties of oxygen NBs, which facilitate the formation of an atmosphere with persistent oxygen supersaturation and the generation of oxidation radicals. This study provides significant insight into applying NBs as a prospective technology for enhanced oxidation processes.

9.
J Agric Food Chem ; 71(23): 8959-8968, 2023 Jun 14.
Article in English | MEDLINE | ID: mdl-37278378

ABSTRACT

Xenocoumacin 1 (Xcn1) is an excellent antimicrobial natural product against Phytophthora capsici. However, the commercial development of Xcn1 is hindered by the low yield, which results in high application costs. In this study, multiple metabolic strategies, including blocking the degradation pathway, promoter engineering, and deletion of competing biosynthetic gene clusters, were employed to improve the production of Xcn1, which was increased from 0.07 to 0.91 g/L. The formation of Xcn1 reached 1.94 g/L in the TB medium with the final strain T3 in a shake flask and further reached 3.52 g/L in a 5 L bioreactor, which is the highest yield ever reported. The engineered strain provides a valuable platform for production of Xcn1, and the possible commercial development of the biofungicide. We anticipate that the metabolic engineering strategies utilized in this study and the constructed constitutive promoter library can be widely applied to other bacteria of the genera Xenorhabdus and Photorhabdus.


Subject(s)
Anti-Infective Agents , Xenorhabdus , Xenorhabdus/genetics , Anti-Infective Agents/metabolism , Benzopyrans/metabolism , Bioreactors/microbiology
10.
Small ; 19(40): e2301934, 2023 Oct.
Article in English | MEDLINE | ID: mdl-37271893

ABSTRACT

Supramolecular hydrogels involved macrocycles have been explored widely in recent years, but it remains challenging to develop hydrogel based on solitary macrocycle with super gelation capability. Here, the construction of lantern[33 ]arene-based hydrogel with low critical gelation concentration (0.05 wt%), which can be used for efficient oil-water separation, is reported. The lantern[33 ]arenes self-assemble into hydrogen-bonded organic nanoribbons, which intertwine into entangled fibers to form hydrogel. This hydrogel which exhibits reversible pH-responsiveness characteristics can be coated on stainless-steel mesh by in situ sol-gel transformation. The resultant mesh exhibits excellent oil-water separation efficiency (>99%) and flux (>6 × 104 L m-2 h-1 ). This lantern[33 ]arene-based hydrogel not only sheds additional light on the gelation mechanisms for supramolecular hydrogels, but also extends the application of macrocycle-based hydrogels as functional interfacial materials.

11.
Commun Biol ; 6(1): 625, 2023 06 10.
Article in English | MEDLINE | ID: mdl-37301913

ABSTRACT

G-quadruplexes (G4s) regulate DNA replication and gene transcription, and are enriched in promoters without fully appreciated functional relevance. Here we show high selection pressure on putative G4 (pG4) forming sequences in promoters through investigating genetic and genomic data. Analyses of 76,156 whole-genome sequences reveal that G-tracts and connecting loops in promoter pG4s display lower or higher allele frequencies, respectively, than pG4-flanking regions, and central guanines (Gs) in G-tracts show higher selection pressure than other Gs. Additionally, pG4-promoters produce over 72.4% of transcripts, and promoter G4-containing genes are expressed at relatively high levels. Most genes repressed by TMPyP4, a G4-ligand, regulate epigenetic processes, and promoter G4s are enriched with gene activation histone marks, chromatin remodeler and transcription factor binding sites. Consistently, cis-expression quantitative trait loci (cis-eQTLs) are enriched in promoter pG4s and their G-tracts. Overall, our study demonstrates selective constraint of promoter G4s and reinforces their stimulative role in gene expression.


Subject(s)
G-Quadruplexes , Transcriptional Activation , Promoter Regions, Genetic , Genome , Genomics
12.
Front Plant Sci ; 14: 1163939, 2023.
Article in English | MEDLINE | ID: mdl-37324705

ABSTRACT

Rice, as a major staple crop, employs multiple strategies to enhance drought tolerance and subsequently increase yield. Osmotin-like proteins have been shown to promote plant resistance to biotic and abiotic stress. However, the drought resistance mechanism of osmotin-like proteins in rice remains unclear. This study identified a novel osmotin-like protein, OsOLP1, that conforms to the structure and characteristics of the osmotin family and is induced by drought and NaCl stress. CRISPR/Cas9-mediated gene editing and overexpression lines were used to investigate the impact of OsOLP1 on drought tolerance in rice. Compared to wild-type plants, transgenic rice plants overexpressing OsOLP1 showed high drought tolerance with leaf water content of up to 65%, and a survival rate of 53.1% by regulating 96% stomatal closure and more than 2.5-fold proline content promotion through the accumulation of 1.5-fold endogenous ABA, and enhancing about 50% lignin synthesis. However, OsOLP1 knockout lines showed severely reduced ABA content, decreased lignin deposition, and weakened drought tolerance. In conclusion, the finding confirmed that OsOLP1 drought-stress modulation relies on ABA accumulation, stomatal regulation, proline, and lignin accumulation. These results provide new insights into our perspective on rice drought tolerance.

13.
Biochim Biophys Acta Rev Cancer ; 1878(4): 188909, 2023 07.
Article in English | MEDLINE | ID: mdl-37172651

ABSTRACT

As ubiquitously expressed transcripts in eukaryotes, circular RNAs (circRNAs) are covalently closed and lack a 5'-cap and 3'-polyadenylation (poly (A)) tail. Initially, circRNAs were considered non-coding RNA (ncRNA), and their roles as sponging molecules to adsorb microRNAs have been extensively reported. However, in recent years, accumulating evidence has demonstrated that circRNAs could encode functional polypeptides through the initiation of translation mediated by internal ribosomal entry sites (IRESs) or N6-methyladenosine (m6A). In this review, we collectively discuss the biogenesis, cognate mRNA products, regulatory mechanisms, aberrant expression and biological phenotypes or clinical relevance of all currently reported, cancer-relevant protein-coding circRNAs. Overall, we provide a comprehensive overview of circRNA-encoded proteins and their physiological and pathological functions.


Subject(s)
MicroRNAs , RNA, Circular , Humans , RNA, Circular/genetics , MicroRNAs/genetics , MicroRNAs/metabolism , RNA, Messenger , Carcinogenesis/genetics , Cell Transformation, Neoplastic
14.
J Pharm Anal ; 13(3): 262-275, 2023 Mar.
Article in English | MEDLINE | ID: mdl-37102105

ABSTRACT

The development of chemoresistance which results in a poor prognosis often renders current treatments for colorectal cancer (CRC). In this study, we identified reduced microvessel density (MVD) and vascular immaturity resulting from endothelial apoptosis as therapeutic targets for overcoming chemoresistance. We focused on the effect of metformin on MVD, vascular maturity, and endothelial apoptosis of CRCs with a non-angiogenic phenotype, and further investigated its effect in overcoming chemoresistance. In situ transplanted cancer models were established to compare MVD, endothelial apoptosis and vascular maturity, and function in tumors from metformin- and vehicle-treated mice. An in vitro co-culture system was used to observe the effects of metformin on tumor cell-induced endothelial apoptosis. Transcriptome sequencing was performed for genetic screening. Non-angiogenic CRC developed independently of angiogenesis and was characterized by vascular leakage, immaturity, reduced MVD, and non-hypoxia. This phenomenon had also been observed in human CRC. Furthermore, non-angiogenic CRCs showed a worse response to chemotherapeutic drugs in vivo than in vitro. By suppressing endothelial apoptosis, metformin sensitized non-angiogenic CRCs to chemo-drugs via elevation of MVD and improvement of vascular maturity. Further results showed that endothelial apoptosis was induced by tumor cells via activation of caspase signaling, which was abrogated by metformin administration. These findings provide pre-clinical evidence for the involvement of endothelial apoptosis and subsequent vascular immaturity in the chemoresistance of non-angiogenic CRC. By suppressing endothelial apoptosis, metformin restores vascular maturity and function and sensitizes CRC to chemotherapeutic drugs via a vascular mechanism.

15.
J Mech Behav Biomed Mater ; 142: 105805, 2023 06.
Article in English | MEDLINE | ID: mdl-37087954

ABSTRACT

Magnesium phosphate cement (MPC) has been evaluated as a novel bone substitute owing to its favorable biocompatibility, plasticity, and osteogenic potential. However, the low porosity of MPC prevents growth factors and osteoblasts from fully growing into the material, thereby limiting its clinical use. In this study, different concentrations (0-5%) of calcium carbonate and citric acid (CA) were used as foaming agents to prepare porous MPC. The MPC containing 3% CaCO3/CA exhibited the best physicochemical properties, including greater porosity, improved injectability, extended setting time, and decreased hydration temperature. The proliferation and adhesion of cells on 3%CaCO3/CA-MPC were higher than those on MPC alone. To explore its osteogenesis in vivo, 3% CaCO3/CA-MPC and Bio-Oss® bone powder were implanted into periodontal bone defects in rats for 4 weeks and 12 weeks, respectively. Micro-CT and histological analysis demonstrated the improved bone regeneration of 3%CaCO3/CA-MPC compared to the blank group (P < 0.05); it had slightly lower bone regeneration than the Bio-Oss® group but no statistical difference. The results indicated that porous MPC foamed with calcium carbonate and CA improved its physicochemical properties and enhanced its biocompatibility, making it a promising material for bone regeneration.


Subject(s)
Bone Cements , Calcium Carbonate , Rats , Animals , Porosity , Calcium Carbonate/pharmacology , Bone Cements/pharmacology , Bone Cements/chemistry , Citric Acid/pharmacology , Bone Regeneration , Osteogenesis , Calcium Phosphates/chemistry
16.
Free Radic Biol Med ; 200: 11-25, 2023 05 01.
Article in English | MEDLINE | ID: mdl-36863620

ABSTRACT

A well-recognized risk factor for periodontitis, diabetes mellitus (DM) aggravates periodontal disease with increasing alveolar bone loss. As a novel myokine, irisin is closely linked with bone metabolism. Nonetheless, the effects of irisin on periodontitis under diabetic conditions and the underlying mechanisms remain poorly understood. Here, we showed that local irisin treatment ameliorates alveolar bone loss and oxidative stress, increases SIRT3 expression within periodontal tissues of our experimentally-induced diabetes and periodontitis (DP) rat models. By culturing the periodontal ligament cells (PDLCs) in vitro, we found that irisin could partially rescue inhibited cell viability, mitigate accumulated intracellular oxidative stress, ameliorate mitochondrial dysfunctions, and restore disturbed osteogenic and osteoclastogenic capacities of PDLCs when exposed to high glucose and pro-inflammatory stimulation. Furthermore, lentivirus-mediated SIRT3 knockdown was employed to unravel the underlying mechanism by which SIRT3 mediated irisin's beneficial effects on PDLCs. Meanwhile, in SIRT3-deficient mice, irisin treatment did not protect against alveolar bone destruction and oxidative stress accumulation in DP models, which underlined the crucial role of SIRT3 in mediating the positive effects of irisin on DP. Our findings, for the first time, revealed that irisin attenuates alveolar bone loss and oxidative stress via activation of the SIRT3 signaling cascade, and highlighted its therapeutic potential for the treatment of DP.


Subject(s)
Alveolar Bone Loss , Diabetes Mellitus , Periodontitis , Sirtuin 3 , Animals , Mice , Rats , Alveolar Bone Loss/drug therapy , Alveolar Bone Loss/prevention & control , Fibronectins/genetics , Oxidative Stress , Periodontitis/drug therapy , Periodontitis/genetics , Sirtuin 3/genetics
17.
J Agric Food Chem ; 71(14): 5554-5564, 2023 Apr 12.
Article in English | MEDLINE | ID: mdl-36995163

ABSTRACT

Fusarium head blight (FHB), caused by Fusarium graminearum, whose occurrence and prevalence causes 10-70% wheat production loss, is one of the most destructive diseases influencing the production of wheat globally. To identify the potential natural products (NPs) against F. graminearum, we screened 59 Xenorhabdus strains and discovered that the cell-free supernatant (CFS) of X. budapestensis 14 (XBD14) displays the highest bioactivity. Multiple genetic methods coupled with HRMS/MS analysis determined the major antifungal NP to be Fcl-29, a fabclavine derivative. Fcl-29 was found to effectively control FHB of wheat in the field test and demonstrated broad-spectrum antifungal activity against important pathogenic fungi. The production of Fcl-29 was dramatically improved by 33.82-fold with the combinatorial strategy of genetic engineering (1.66-fold) and fermentation engineering (20.39-fold). The exploration of a new biofungicide in global plant protection is now possible.


Subject(s)
Antifungal Agents , Fusarium , Plant Diseases/microbiology , Triticum/genetics
18.
Front Microbiol ; 14: 1107649, 2023.
Article in English | MEDLINE | ID: mdl-36778865

ABSTRACT

The feasibility of sulfur enhancement for uranium bioleaching in column reactors was assessed with a designed mixed Acidithiobacillus ferrooxidans, Acidithiobacillus thiooxidans and Leptospirillum ferriphilum from a refractory uranium ore. The uranium extraction reached 86.2% with the sulfur enhancement (1 g/kg) in 77 days leaching process, increased by 12.6% vs. the control without sulfur addition. The kinetic analysis showed that uranium bioleaching with sulfur enhancement in columns followed an internal diffusion through the product layer-controlled model. Ore residue characteristics indicated that sulfur enhancement could strengthen the porosity of passivation layer, improving the ore permeability. Notably, bacterial community analysis showed that sulfur enhancement at 1 g/kg could make the iron-oxidizing and sulfur-oxidizing bacteria on the ore surface maintain a good balance (approx. 1:1), and thus decomposing ore more effectively. Lastly, a possible mechanism model for uranium bioleaching with sulfur enhancement was proposed.

19.
Eur J Pharmacol ; 944: 175592, 2023 Apr 05.
Article in English | MEDLINE | ID: mdl-36804835

ABSTRACT

Abnormal tumor vasculature blocks the extravasation of T lymphocytes into the tumor, thereby suppressing anti-tumor immunity. Recently, metformin has been shown to affect tumor vasculature and enhance T lymphocyte anti-tumor immunity. However, whether or how metformin affects T lymphocyte anti-tumor immunity via a vascular mechanism remains poorly understood. Herein, we show that a large number of CD8+ lymphocytes gathered in the peri-tumoral region, while very few infiltrated the tumor. Metformin administration increased the expression of anti-tumor immunity-associated genes and the number of tumor-infiltrating CD8+ lymphocytes. Injection of CD8 but not CD4 neutralization antibody into tumor-bearing mice significantly abrogated the anti-tumor effect of metformin. Critically, CD8+ lymphocytes were found to pass through the wall of perfused vessel. Further results of immunofluorescent staining showed that metformin greatly elevated tumor perfusion, which was accompanied by increased vascular maturity in the intratumoral region (ITR) but not peritumoral region (PTR). These findings provide evidence for the vascular mechanism involved in metformin-induced enhancement of T lymphocyte anti-tumor immunity. By remodeling the abnormal tumor vasculature, also called vessel normalization metformin increases vascular maturity and tumor perfusion, thus allowing more CD8+ lymphocytes to infiltrate the tumor.


Subject(s)
Metformin , Neoplasms , Mice , Animals , CD8-Positive T-Lymphocytes , Metformin/pharmacology , Lymphocytes, Tumor-Infiltrating , Neoplasms/pathology , CD4-Positive T-Lymphocytes
20.
Cells ; 12(2)2023 01 04.
Article in English | MEDLINE | ID: mdl-36672157

ABSTRACT

Polydatin (PD) is a natural compound with anticancer activities, but the underlying mechanisms remain largely unclear. To understand how PD inhibited hepatocellular carcinoma (HCC), we studied PD treatments in HCC HepG2 and SK-HEP1 cells, and normal liver HL-7702 cells. PD selectively blocked the proliferation of HCC cells but showed low toxicity in normal cells, while the effects of doxorubicin (DOX) and cisplatin (DDP) on HCC and normal liver cells were opposite. In the cotreatment studies, PD synergistically improved the inhibitory activities of DOX and DDP in HCC cells but alleviated their toxicity in HL-7702 cells. Furthermore, RNA-seq studies of PD-treated HepG2 cells revealed multiple altered signaling pathways. We identified 1679 Differentially Expressed Genes (DEGs) with over a 2.0-fold change in response to PD treatment. Integrative analyses using the DEGs in PD-treated HepG2 cells and DEGs in a TCGA dataset of HCC patients revealed five PD-repressed DEGs regulating mitotic spindle midzone formation. The expression of these genes showed significantly positive correlation with poor clinical outcomes of HCC patients, suggesting that mitotic machinery was likely a primary target of PD. Our findings improve the understanding of PD's anticancer mechanisms and provide insights into developing effective clinical approaches in HCC therapies.


Subject(s)
Carcinoma, Hepatocellular , Liver Neoplasms , Humans , Carcinoma, Hepatocellular/metabolism , Cisplatin/pharmacology , Cisplatin/therapeutic use , Liver Neoplasms/metabolism , Cell Line, Tumor , Doxorubicin/pharmacology , Doxorubicin/therapeutic use , Cell Proliferation
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